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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THYM rs6902411 chr6:26630269 A/C ZNF322B chr9:99957633-99961910:- 0.75 7.57 2.37E-11 Box Plot
THYM rs6911540 chr6:26603259 T/C ZNF322B chr9:99957633-99961910:- 0.76 7.52 3.11E-11 Box Plot
THYM rs6915555 chr6:26595267 G/T ZNF322B chr9:99957633-99961910:- 0.76 7.52 3.11E-11 Box Plot
THYM rs6919391 chr6:26608325 G/A ZNF322B chr9:99957633-99961910:- 0.75 7.35 6.78E-11 Box Plot
THYM rs6931849 chr6:26603417 A/G ZNF322B chr9:99957633-99961910:- 0.75 7.35 6.78E-11 Box Plot
THYM rs6935625 chr6:44690112 A/G PPP2R3A chr3:135684515-135866733:+ 1.38 8.11 1.79E-12 Box Plot
THYM rs7047346 chr9:1000520 A/G HNRNPCL1 chr1:12907261-12908578:- 0.46 7.59 2.16E-11 Box Plot
THYM rs70600 chr17:44860021 C/T LOC644172 chr17:43677491-43679748:- 1.11 11.98 1.09E-20 Box Plot
THYM rs70600 chr17:44860021 C/T LRRC37A4 chr17:43578685-43595516:- -0.58 -9.21 8.19E-15 Box Plot
THYM rs70602 chr17:44859715 T/C LOC644172 chr17:43677491-43679748:- -1.07 -11.07 8.83E-19 Box Plot
THYM rs70602 chr17:44859715 T/C LRRC37A4 chr17:43578685-43595516:- 0.56 8.92 3.29E-14 Box Plot
THYM rs71601339 chr5:176544496 A/G LOC388955 chr2:63849182-63850159:- -0.84 -12.86 1.62E-22 Box Plot
THYM rs71601343 chr5:176632107 G/A LOC388955 chr2:63849182-63850159:- -0.84 -12.19 3.85E-21 Box Plot
THYM rs71601344 chr5:176633493 G/A LOC388955 chr2:63849182-63850159:- -0.84 -12.19 3.85E-21 Box Plot
THYM rs7202271 chr16:30022656 G/C ZNF254 chr19:24216207-24312763:+ 0.66 7.13 1.93E-10 Box Plot